PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Traes_5AL_D9A4DFF71.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bZIP
Protein Properties Length: 154aa    MW: 17166.4 Da    PI: 9.0804
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Traes_5AL_D9A4DFF71.1genomeIWGSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_137.35.9e-123089362
                           XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                 bZIP_1  3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkse 62
                           e +r rrk++NRe+ArrsR RK++ ++ L   v++L+++ +++   l + +++  +l+++
  Traes_5AL_D9A4DFF71.1 30 EKRRKRRKESNRESARRSRVRKQQHLDDLSLQVDQLKNQSQQMNMVLGMTTQNLVALQAQ 89
                           5689*************************************9998888777776666665 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003382.4E-102892IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.4273093IPR004827Basic-leucine zipper domain
PfamPF001706.2E-93078IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1709.5E-93289No hitNo description
SuperFamilySSF579591.27E-103287No hitNo description
CDDcd147021.92E-143372No hitNo description
PROSITE patternPS0003603550IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 154 aa     Download sequence    Send to blast
MSSGTSFTSS QGTRSSRSAE DCPDLRAQME KRRKRRKESN RESARRSRVR KQQHLDDLSL  60
QVDQLKNQSQ QMNMVLGMTT QNLVALQAQN SVMQTQKMEL ESRLCALGEI ICCMNSITST  120
ANPVAAMGAT TSSAYDIFGA GSTWSQPIDL YQCF
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
13036KRRKRRK
23237RKRRKE
34450RRSRVRK
44451RRSRVRKQ
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3644280.0AK364428.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2025A24.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003577967.11e-82PREDICTED: ocs element-binding factor 1-like
TrEMBLM7YVF81e-111M7YVF8_TRIUA; Ocs element-binding factor 1
TrEMBLW5F2091e-111W5F209_WHEAT; Uncharacterized protein
STRINGMLOC_71104.23e-95(Hordeum vulgare)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP37403276
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75390.13e-11basic leucine-zipper 44
Publications ? help Back to Top
  1. Brenchley R, et al.
    Analysis of the bread wheat genome using whole-genome shotgun sequencing.
    Nature, 2012. 491(7426): p. 705-10
    [PMID:23192148]